BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020F10LP1|AL427655
(854 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig635 1622 0.0
>3x_Contig635
Length = 2061
Score = 1622 bits (808), Expect = 0.0
Identities = 835/853 (97%), Gaps = 1/853 (0%)
Strand = Plus / Plus
Query: 1 agggaattattctgattgtatttdagtctctctttgtttcgttgaatgcatgttctctta 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 252 agggaattattctgattgtatttaagtctctctttgtttcgttgaatgcatgttctctta 311
Query: 61 cctctgatatcttggaattgagtcgagtgtraaccatcagatcaatattatrttrgctaa 120
|||||||||||||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct: 312 cctctgatatcttggaattgagtcgagtgtaaaccatcagatcaatattatattagctaa 371
Query: 121 ggrtgaatcccacgatgtatcagaatgattttgtgacgatttcacaggagactctgcggg 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ggatgaatcccacgatgtatcagaatgattttgtgacgatttcacaggagactctgcggg 431
Query: 181 atggcacgatgtttaatttgcvattgavaaggacaccaccggctgataatatggacaata 240
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 432 atggcacgatgtttaatttgcaattgaaaaggacaccaccggctgataatatggacaata 491
Query: 241 gcaatattggrgctaatvagtataatcagtggcagtttgattacgaagagcaagarctga 300
|||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 492 gcaatattggagctaataagtataatcagtggcagtttgattacgaagagcaagaactga 551
Query: 301 gtratgatttgaccggraagaccttggaggatgagatcttcagtttccagcaaggractt 360
|| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 552 gtaatgatttgaccggaaagaccttggaggatgagatcttcagtttccagcaaggaactt 611
Query: 361 caatcagggccatgggcgacgatatcaganggttatcgataagcgagtrccatcgtgacg 420
||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 612 caatcagggccatgggcgacgatatcagaaggttatcgataagcgagtaccatcgtgacg 671
Query: 421 atccaatgtactatgagtatgagtttttcaacaaagatgtgatgaacggtagtagtagta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 atccaatgtactatgagtatgagtttttcaacaaagatgtgatgaacggtagtagtagta 731
Query: 481 gggtaggtratcttgggggcatgggtagttctaggtccggatctgtgttttctgatgagg 540
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 gggtaggtaatcttgggggcatgggtagttctaggtccggatctgtgttttctgatgagg 791
Query: 541 ataacgagtttgatatcgacatggatcaagagtcaatttttgtcaacgtggggtcaaaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 ataacgagtttgatatcgacatggatcaagagtcaatttttgtcaacgtggggtcaaaat 851
Query: 601 ctgtgaacgatgcaacgcggacagtaccacatacaacgaattcaatggcattgttgttat 660
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 ctgtgaacgatgcaacgcagacagtaccacatacaacgaattcaatggcattgttgttat 911
Query: 661 ctggattggatgaagatgtgtccatgaacttggatttggacgatgagaatgatggtactg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 912 ctggattggatgaagatgtgtccatgaacttggatttggacgatgagaatgatggtactg 971
Query: 721 gtaacagtgggggtgaagaaactattcaaattgaataagatgttcaggaacaacaacaat 780
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 972 gtaacagt-ggggtgaagaaactattcaaattgaataagatgttcaggaacaacaacaat 1030
Query: 781 agagacctcatatcggatgatgaacctcagcagatcttcaagaagaagtacttctggtcc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1031 agagacctcatatcggatgatgaacctcagcagatcttcaagaagaagtacttctggtcc 1090
Query: 841 cgaaaaccaacgg 853
|||||||||||||
Sbjct: 1091 cgaaaaccaacgg 1103
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6128
Number of Sequences: 1807
Number of extensions: 6128
Number of successful extensions: 119
Number of sequences better than 1.0e-20: 1
length of query: 854
length of database: 10,358,551
effective HSP length: 16
effective length of query: 838
effective length of database: 10,329,639
effective search space: 8656237482
effective search space used: 8656237482
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.8 bits)